Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914045.1_cds_XP_016464070.1_57139
CDS Infomation

[gene=LOC107787064] [db_xref=GeneID:107787064] [protein=probable protein phosphatase 2C 65] [protein_id=XP_016464070.1] [location=complement(join(42625..43059,43652..43875,44289..44406,44512..44820,45394..45651))] [gbkey=CDS]
Sequence

ATGGGTGCATGTTGTACCTGTCAAAGGGGCCAAAATTTTGAAGGCAAACATCATAATCAC
AATCATAATAATAATCATCATAATTATTATGAGGAAAATAATGGGGAGCAGAAAGAGATT
GAAGATGATTATCAAAGCATAGTAGGAAGAGGAGACTTGGGTGCCAATGTCAGGTTATGT
GGATTTTCTAAATTTGTATCAATGTATAGTCAACAAGGTAAAAAAGGGATCAATCAAGAT
GCCATGACTGTTTGGGAGAACTTTGGTGGACAGAAAGGTATGTTCTTCTGTGGTGTGTTT
GACGGACATGGACCCTCTGGCCACAAGGTTGCGCGCTATGTTAGAGATTTCTTACCTTCC
AAAATTTCATCATATAATAATGAGATCAGTACCAACAGTATTAGATGGGATGTCGAAAAG
GATGATGATGAAGCTTACAACCCATATTTTGCTGCTTGGAAAGATAAATTTCTCAAGTCT
TTTAAAGAAATGGATCAAGAACTTGAAGGTGATGGTTCTATTGAAAGCTATTGCAGTGGC
ACGACAGCAGTGACTTTAGTTAAACAGGGAGAACATTTGATAGTTGGAAATTTAGGAGAT
TCTCGCGCTATTATTTGCACCAGGGACGACAAAAATGAGCTTGTTTCTCAACAACTCACA
GTGGACTTGAAGCCTAACCTTCCAGCTGAATATGAGAGAATAAGAAGTTGTGAAGGAAGA
GTAATGGCAATGGAGGAAGAACCAAGTGTATATAGGGTGTGGATGCCGGATCAAGATTGC
CCTGGCCTTGCCATGGCTAGAGCTTTTGGAGATTTTTGCTTAAAAGACTTTGGCCTCATC
TCTGTCCCTGAAGTTTATTATAGAAAGCTTACTGAGAAAGATGAATTCATTGTCTTGGCA
ACAGATGGGTTGTGGGATGTTTTAAGCAACGATGAAGTGATACGTATAGTAGCAACAGCA
AGGAAGCGATCTATTGCAGCAAGATTGGTGGTGCATCATGCGGTTCGAGCCTGGAAATAC
AAGTACCCTTGTGCCAAGATCGATGATTGTGCTGTCGTATGCTTGTTCTTGAAACGCCAG
AGGCCTCTGCTAACGAAATCATTGTCAGAAGTGACTGAGCTGAGCTTAAATTACACAGAG
CTAGCAAGCAGTCAAAACAACACCCCCAACTCAAAAATAGATGATGGTCTTGATACACTG
CTAAATTATCAACTCAAGGAAGAAAAAGATCCAAATGTAGCATTTGCAACTGGACTTAAT
GATGGATCAGGTAATGATAATAACAAGAGTTCGTCAAGGCACGCTCGTTACCTTAGCAGA
AGAAAATCTGCAATGAATTTTTGA

Peptide Sequence

PEP ID

XP_016464070.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 65 [Nicotiana tabacum]
Sequence

MGACCTCQRGQNFEGKHHNHNHNNNHHNYYEENNGEQKEIEDDYQSIVGRGDLGANVRLC
GFSKFVSMYSQQGKKGINQDAMTVWENFGGQKGMFFCGVFDGHGPSGHKVARYVRDFLPS
KISSYNNEISTNSIRWDVEKDDDEAYNPYFAAWKDKFLKSFKEMDQELEGDGSIESYCSG
TTAVTLVKQGEHLIVGNLGDSRAIICTRDDKNELVSQQLTVDLKPNLPAEYERIRSCEGR
VMAMEEEPSVYRVWMPDQDCPGLAMARAFGDFCLKDFGLISVPEVYYRKLTEKDEFIVLA
TDGLWDVLSNDEVIRIVATARKRSIAARLVVHHAVRAWKYKYPCAKIDDCAVVCLFLKRQ
RPLLTKSLSEVTELSLNYTELASSQNNTPNSKIDDGLDTLLNYQLKEEKDPNVAFATGLN
DGSGNDNNKSSSRHARYLSRRKSAMNF

Transcript Sequence

Gene sequence data has not been registered.